Just create 2 different app ids on the provisioning portal with 2 different bundle identifiers and upload them to itunes connect as 2 different apps.
But the best thing you can do is use only one free version and unlock the “Full version” with an In App Purchase that changes a boolean (ej:boughtFullVersion), and check that boolean on the “Full version” features, to make them only work if the “Full version” was purchased
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solved Submit to app store as lite version and full version [closed]