You should print the prompt before you accept user input, otherwise you won’t know what you are entering. For example, in your code
String Destination = S.nextLine();
System.out.println("Specify :" + Destination);
That first line will halt and wait for output with no prompt as what to enter.
Changing around a few lines should get you your expected results.
System.out.print("Specify Destination: ");
String Destination = S.nextLine();
System.out.print("Specify Max Time (HH:MM): ");
String specificTime = S.nextLine();
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solved If else statements and subStrings (new to programming in Java)